Overview of the Tentative HIBIT 2022 Program
Last Updated Oct.20 2022
| Day 1: Oct 20, 2022-Thursday | |||||
|---|---|---|---|---|---|
| EVENT | TIME(GMT+3) | Speaker | Title | ||
| Start | End | ||||
| Registration | 09:00 | 10:00 | Registration | ||
| Welcome & Coffee | 11:00 | 11:30 | Can Koşukcu | Bioinformatics Solutions by QIAGEN | |
| Opening | 11:30 | 11:45 | Barış Salihoğlu | Opening | |
| Keynote Talk | 12:00 | 13:00 | Igor Jouline, OSU/USA | Amino acid sensor conserved from bacteria to humans | |
| Lunch | 13:00 | 14:00 | Lunch | ||
| Invited Talk 1 | 14:00 | 14:45 | Yesid Cuesta Astroz , CES/CO | Multi-omics Data Integration and Network-Based Analysis in the Understanding of Host-Pathogen Interactions | |
| CP Talk 1 | 14:45 | 15:10 | Melike Berksöz | Computational Design Of A Genetically Encoded Iron Biosensor | |
| Selected Talk 1 | 15:10 | 15:20 | Mehdi Kosaca | PROT-ON: Structure-Based Detection of Critical Mutations in Redesigning Protein-Protein Interfaces | |
| Coffee Break | 15:20 | 15:30 | Coffee Break | ||
| CP Talk 2 | 15:30 | 15:55 | Asli Kutlu | Probing The Structural Impacts Of Arg388 Replacements In Pkp2 Proteın Complex: Spesıfıc Case In Arvc | |
| Selected Talk 2 | 15:55 | 16:05 | Serbulent Ünsal | A Protein Representation Model for Low-Data Protein Function Prediction | |
| Selected Talk 3 | 16:05 | 16:15 | Almotasem Belah Alhamwi | Insight Into Impact of High Resistance-Causing Mutations on Penicillin Binding Protein 3 Of H. Influenzae Suggests an Alternative Approach for Combating Antibiotic Resistance | |
| Poster | 16:15 | 17:15 | Poster Session 1 | ||
| Invited Talk 2 | 17:30 | 18:15 | Süreyya Özcan, METU/TR | Dancing in the Dark: Discovering the Boundaries | |
| Selected Talk 4 | 18:15 | 18:25 | Gökçe Uludoğan | Exploiting Pretrained Biochemical Language Models for Targeted Drug Design | |
| Selected Talk 5 | 18:25 | 18:35 | Damla Övek Baydar | Predicting protein-protein interactions using GCN-based encoder-decoder combined with a transformer | |
| Selected Talk 6 | 18:35 | 18:45 | Atabey Ünlü | Disease Centric Large Scale De Novo Design of Drug Candidate Molecules with Graph Generative Deep Adversarial Networks | |
| Day 2: Oct 21, 2022-Friday | ||||||
|---|---|---|---|---|---|---|
| EVENT | TIME(GMT+3) | Speaker | Title | |||
| Start | End | |||||
| Registration | 08:00 | — | Registration | |||
| CP Talk 3 | 9:30 | 10:00 | Deniz Sezin Ayvaz | Investigating Conversion From Mild Cognitive Impairment To Alzheimer’s Disease Using Latent Space Manipulation | Workshop: Stuctural Bioinformatics Techniques (8:30-12:30) Yesid Cuesta Astroz, PhD Burcu Özden Yücel Ezgi Karaca,PhD |
|
| Selected Talk 7 | 10:00 | 10:15 | Ayşe Nur Çoruh | Artificial Learning and Multi-Omics Based Analysis of Large-Scale Cancer Data for Personalized Survival Prediction | ||
| Selected Talk 8 | 10:15 | 10:30 | Hakan Kuru | Smart Health Coaching: Behaviour Change Mechanisms and Interaction Strategies in Workplace Health Promotion | ||
| Selected Talk 9 | 10:30 | 10:45 | Melisa Acun | Copy-fm: A TOOL FOR DETERMINING FRACTION OF MOSAICISM IN COPY NUMBER VARIATIONS | ||
| Coffee Break | 10:45 | 11:00 | Coffee Break | |||
| Poster | 11:00 | 12:30 | Poster Session 2 | |||
| Lunch | 12:30 | 13:30 | Lunch | |||
| Invited Talk 3 | 13:30 | 14:15 | Simon Blanchoud | Investigating the Basis of Chordate Whole-body Regeneration by Comparative De Novo Genome Assembly | ||
| Selected Talk 10 | 14:15 | 14:30 | Onur Önder | ALLOSTERIC CHANGES IN THE CENTROMERE-SPECIFIC NUCLEOSOME IN RESPONSE TO PHYSICAL FACTORS | ||
| Selected Talk 11 | 14:30 | 14:45 | Mehmet Somel | Ancient Upper Mesopotamia, 10,000 years ago: first genomic impressions | ||
| Selected Talk 12 | 14:45 | 15:00 | Nurdan Kuru | A Novel Phylogeny-Dependent Coevolution Algorithm | ||
| Networking | 15:00 | 16:00 | Networking | |||
| Coffee Break | 16:00 | 16:15 | Coffee Break | |||
| TRUBA Session | 16:15 | 16:45 | Kerem Karabay | TRUBA Session | ||
| Keynote Talk | 17:00 | 18:00 | Ludmil Alexandrov, UCSD/USA | Anthology of unusual patterns of somatic mutations in cancer genomes | ||
| Closing Remarks | 18:00 | 19:00 | HIBIT AWARD Presentation in memory of NEŞE YALABIK | |||
| Gala Dinner | 20:00 | – | Gala Dinner | |||
| Day 3: Oct 22, 2022-Saturday RSG Turkey – ONLINE PROGRAM | |||||
|---|---|---|---|---|---|
| EVENT | TIME(GMT+3) | Online | Presenter | Title | |
| Start | End | ||||
| Opening | 10:20 | 10:30 | Opening | ||
| Keynote 1 | 10:30 | 11:15 | Online | Yasin Kaymaz, PhD | Yet Another New Era for Transcriptomics: Single-Cell |
| Student Presentation 1 | 11:15 | 11:30 | Online | Barış Altunkara | Investigation of Effects of Microenvironment and Immune Cells on Tumor Growth by Agent Based Modeling |
| Student Presentation 2 | 11:30 | 11:45 | Online | Büşra Savaş | A C-term Truncated EIF2Bγ Protein Encoded by an Intronically Polyadenylated Isoform Introduces Unfavorable EIF2Bγ–EIF2γ Interactions |
| Student Presentation 3 | 11:45 | 12:00 | Online | Merve Uça | Assessment of machine-learning- versus experimental structural models of sex-specific isoforms of linker histone H1 |
| Lunch | 12:00 | 13:00 | Lunch | ||
| Essential Guide for Graduates | 13:00 | 14:15 | Essential Guide for Graduates | ||
| Student Presentation 4 | 14:15 | 14:30 | Record | Onur Doğan | Sex-biased Expression of Neuroimmune Guidance Cues in Cardiovascular Diseases |
| Coffee Break | 14:30 | 14:45 | Coffee Break | ||
| Student Presentation 5 | 14:45 | 15:00 | Online | Emrah Akkoyun | Reproducable and Scalable Data Analysis on High Performance Computing |
| Keynote 2 | 15:00 | 15:45 | Online | Assoc. Prof. Duygu Ucar | Sex Differences in Vaccine Responses |
| Coffee Break | 15:45 | 16:00 | Coffee Break | ||
| Student Presentation 6 | 16:00 | 16:15 | Online | Gülben Avşar | Impact of Imputation on the Cell Type Identification in scRNA-seq Datasets |
| Keynote 3 | 16:15 | 17:00 | Online | Gokcen Eraslan, PhD | Toward Understanding Disease Gene Function with Single Cell Genomics and Machine Learning |
| Networking | 17:00 | 17:30 | Networking | ||
| Day 3: Oct 22, 2022-Saturday ONSITE PROGRAM | |||||
|---|---|---|---|---|---|
| EVENT | TIME(GMT+3) | Title | |||
| Start | End | ||||
| Breakfast with PIs | 08:00 | 12:00 | Breakfast | ||
| Checkout | – | 12:00 | Checkout until 12:00 | ||
| Social Program | 12:30 | – | Lunch and visit to Tarsus | ||
| Transfer | – | – | Transfer to Airport After Social Program | ||